diff --git a/Dockerfile b/Dockerfile
index 90f0e36a5..141a6f9b3 100644
--- a/Dockerfile
+++ b/Dockerfile
@@ -2,7 +2,7 @@ FROM ghcr.io/astral-sh/uv:python3.12-bookworm-slim
 
 # Install Node.js 20 for the WhatsApp bridge
 RUN apt-get update && \
-    apt-get install -y --no-install-recommends curl ca-certificates gnupg git openssh-client && \
+    apt-get install -y --no-install-recommends curl ca-certificates gnupg git bubblewrap openssh-client && \
     mkdir -p /etc/apt/keyrings && \
     curl -fsSL https://deb.nodesource.com/gpgkey/nodesource-repo.gpg.key | gpg --dearmor -o /etc/apt/keyrings/nodesource.gpg && \
     echo "deb [signed-by=/etc/apt/keyrings/nodesource.gpg] https://deb.nodesource.com/node_20.x nodistro main" > /etc/apt/sources.list.d/nodesource.list && \
@@ -32,8 +32,13 @@ RUN git config --global --add url."https://github.com/".insteadOf ssh://git@gith
     npm install && npm run build
 WORKDIR /app
 
-# Create config directory
-RUN mkdir -p /root/.nanobot
+# Create non-root user and config directory
+RUN useradd -m -u 1000 -s /bin/bash nanobot && \
+    mkdir -p /home/nanobot/.nanobot && \
+    chown -R nanobot:nanobot /home/nanobot /app
+
+USER nanobot
+ENV HOME=/home/nanobot
 
 # Gateway default port
 EXPOSE 18790
diff --git a/README.md b/README.md
index b62079351..3735addda 100644
--- a/README.md
+++ b/README.md
@@ -1434,16 +1434,19 @@ MCP tools are automatically discovered and registered on startup. The LLM can us
 ### Security
 
 > [!TIP]
-> For production deployments, set `"restrictToWorkspace": true` in your config to sandbox the agent.
+> For production deployments, set `"restrictToWorkspace": true` and `"tools.exec.sandbox": "bwrap"` in your config to sandbox the agent.
 > In `v0.1.4.post3` and earlier, an empty `allowFrom` allowed all senders. Since `v0.1.4.post4`, empty `allowFrom` denies all access by default. To allow all senders, set `"allowFrom": ["*"]`.
 
 | Option | Default | Description |
 |--------|---------|-------------|
 | `tools.restrictToWorkspace` | `false` | When `true`, restricts **all** agent tools (shell, file read/write/edit, list) to the workspace directory. Prevents path traversal and out-of-scope access. |
+| `tools.exec.sandbox` | `""` | Sandbox backend for shell commands. Set to `"bwrap"` to wrap exec calls in a [bubblewrap](https://github.com/containers/bubblewrap) sandbox — the process can only see the workspace (read-write) and media directory (read-only); config files and API keys are hidden. Automatically enables `restrictToWorkspace` for file tools. **Linux only** — requires `bwrap` installed (`apt install bubblewrap`; pre-installed in the Docker image). Not available on macOS or Windows (bwrap depends on Linux kernel namespaces). |
 | `tools.exec.enable` | `true` | When `false`, the shell `exec` tool is not registered at all. Use this to completely disable shell command execution. |
 | `tools.exec.pathAppend` | `""` | Extra directories to append to `PATH` when running shell commands (e.g. `/usr/sbin` for `ufw`). |
 | `channels.*.allowFrom` | `[]` (deny all) | Whitelist of user IDs. Empty denies all; use `["*"]` to allow everyone. |
 
+**Docker security**: The official Docker image runs as a non-root user (`nanobot`, UID 1000) with bubblewrap pre-installed. When using `docker-compose.yml`, the container drops all Linux capabilities except `SYS_ADMIN` (required for bwrap's namespace isolation).
+
 
 ### Timezone
 
diff --git a/SECURITY.md b/SECURITY.md
index d98adb6e9..8e65d4042 100644
--- a/SECURITY.md
+++ b/SECURITY.md
@@ -64,6 +64,7 @@ chmod 600 ~/.nanobot/config.json
 
 The `exec` tool can execute shell commands. While dangerous command patterns are blocked, you should:
 
+- ✅ **Enable the bwrap sandbox** (`"tools.exec.sandbox": "bwrap"`) for kernel-level isolation (Linux only)
 - ✅ Review all tool usage in agent logs
 - ✅ Understand what commands the agent is running
 - ✅ Use a dedicated user account with limited privileges
@@ -71,6 +72,19 @@ The `exec` tool can execute shell commands. While dangerous command patterns are
 - ❌ Don't disable security checks
 - ❌ Don't run on systems with sensitive data without careful review
 
+**Exec sandbox (bwrap):**
+
+On Linux, set `"tools.exec.sandbox": "bwrap"` to wrap every shell command in a [bubblewrap](https://github.com/containers/bubblewrap) sandbox. This uses Linux kernel namespaces to restrict what the process can see:
+
+- Workspace directory → **read-write** (agent works normally)
+- Media directory → **read-only** (can read uploaded attachments)
+- System directories (`/usr`, `/bin`, `/lib`) → **read-only** (commands still work)
+- Config files and API keys (`~/.nanobot/config.json`) → **hidden** (masked by tmpfs)
+
+Requires `bwrap` installed (`apt install bubblewrap`). Pre-installed in the official Docker image. **Not available on macOS or Windows** — bubblewrap depends on Linux kernel namespaces.
+
+Enabling the sandbox also automatically activates `restrictToWorkspace` for file tools.
+
 **Blocked patterns:**
 - `rm -rf /` - Root filesystem deletion
 - Fork bombs
@@ -82,6 +96,7 @@ The `exec` tool can execute shell commands. While dangerous command patterns are
 
 File operations have path traversal protection, but:
 
+- ✅ Enable `restrictToWorkspace` or the bwrap sandbox to confine file access
 - ✅ Run nanobot with a dedicated user account
 - ✅ Use filesystem permissions to protect sensitive directories
 - ✅ Regularly audit file operations in logs
@@ -232,7 +247,7 @@ If you suspect a security breach:
 1. **No Rate Limiting** - Users can send unlimited messages (add your own if needed)
 2. **Plain Text Config** - API keys stored in plain text (use keyring for production)
 3. **No Session Management** - No automatic session expiry
-4. **Limited Command Filtering** - Only blocks obvious dangerous patterns
+4. **Limited Command Filtering** - Only blocks obvious dangerous patterns (enable the bwrap sandbox for kernel-level isolation on Linux)
 5. **No Audit Trail** - Limited security event logging (enhance as needed)
 
 ## Security Checklist
@@ -243,6 +258,7 @@ Before deploying nanobot:
 - [ ] Config file permissions set to 0600
 - [ ] `allowFrom` lists configured for all channels
 - [ ] Running as non-root user
+- [ ] Exec sandbox enabled (`"tools.exec.sandbox": "bwrap"`) on Linux deployments
 - [ ] File system permissions properly restricted
 - [ ] Dependencies updated to latest secure versions
 - [ ] Logs monitored for security events
@@ -252,7 +268,7 @@ Before deploying nanobot:
 
 ## Updates
 
-**Last Updated**: 2026-02-03
+**Last Updated**: 2026-04-05
 
 For the latest security updates and announcements, check:
 - GitHub Security Advisories: https://github.com/HKUDS/nanobot/security/advisories
diff --git a/docker-compose.yml b/docker-compose.yml
index 5c27f81a0..2b2c9acd1 100644
--- a/docker-compose.yml
+++ b/docker-compose.yml
@@ -3,7 +3,14 @@ x-common-config: &common-config
     context: .
     dockerfile: Dockerfile
   volumes:
-    - ~/.nanobot:/root/.nanobot
+    - ~/.nanobot:/home/nanobot/.nanobot
+  cap_drop:
+    - ALL
+  cap_add:
+    - SYS_ADMIN
+  security_opt:
+    - apparmor=unconfined
+    - seccomp=unconfined
 
 services:
   nanobot-gateway:
diff --git a/nanobot/agent/loop.py b/nanobot/agent/loop.py
index 25a81b62b..93dcaabec 100644
--- a/nanobot/agent/loop.py
+++ b/nanobot/agent/loop.py
@@ -262,7 +262,7 @@ class AgentLoop:
 
     def _register_default_tools(self) -> None:
         """Register the default set of tools."""
-        allowed_dir = self.workspace if self.restrict_to_workspace else None
+        allowed_dir = self.workspace if (self.restrict_to_workspace or self.exec_config.sandbox) else None
         extra_read = [BUILTIN_SKILLS_DIR] if allowed_dir else None
         self.tools.register(ReadFileTool(workspace=self.workspace, allowed_dir=allowed_dir, extra_allowed_dirs=extra_read))
         for cls in (WriteFileTool, EditFileTool, ListDirTool):
@@ -274,6 +274,7 @@ class AgentLoop:
                 working_dir=str(self.workspace),
                 timeout=self.exec_config.timeout,
                 restrict_to_workspace=self.restrict_to_workspace,
+                sandbox=self.exec_config.sandbox,
                 path_append=self.exec_config.path_append,
             ))
         if self.web_config.enable:
diff --git a/nanobot/agent/subagent.py b/nanobot/agent/subagent.py
index 8ea4b6c06..585139972 100644
--- a/nanobot/agent/subagent.py
+++ b/nanobot/agent/subagent.py
@@ -111,7 +111,7 @@ class SubagentManager:
         try:
             # Build subagent tools (no message tool, no spawn tool)
             tools = ToolRegistry()
-            allowed_dir = self.workspace if self.restrict_to_workspace else None
+            allowed_dir = self.workspace if (self.restrict_to_workspace or self.exec_config.sandbox) else None
             extra_read = [BUILTIN_SKILLS_DIR] if allowed_dir else None
             tools.register(ReadFileTool(workspace=self.workspace, allowed_dir=allowed_dir, extra_allowed_dirs=extra_read))
             tools.register(WriteFileTool(workspace=self.workspace, allowed_dir=allowed_dir))
@@ -124,6 +124,7 @@ class SubagentManager:
                     working_dir=str(self.workspace),
                     timeout=self.exec_config.timeout,
                     restrict_to_workspace=self.restrict_to_workspace,
+                    sandbox=self.exec_config.sandbox,
                     path_append=self.exec_config.path_append,
                 ))
             if self.web_config.enable:
diff --git a/nanobot/agent/tools/sandbox.py b/nanobot/agent/tools/sandbox.py
new file mode 100644
index 000000000..459ce16a3
--- /dev/null
+++ b/nanobot/agent/tools/sandbox.py
@@ -0,0 +1,55 @@
+"""Sandbox backends for shell command execution.
+
+To add a new backend, implement a function with the signature:
+    _wrap_<name>(command: str, workspace: str, cwd: str) -> str
+and register it in _BACKENDS below.
+"""
+
+import shlex
+from pathlib import Path
+
+from nanobot.config.paths import get_media_dir
+
+
+def _bwrap(command: str, workspace: str, cwd: str) -> str:
+    """Wrap command in a bubblewrap sandbox (requires bwrap in container).
+
+    Only the workspace is bind-mounted read-write; its parent dir (which holds
+    config.json) is hidden behind a fresh tmpfs.  The media directory is
+    bind-mounted read-only so exec commands can read uploaded attachments.
+    """
+    ws = Path(workspace).resolve()
+    media = get_media_dir().resolve()
+
+    try:
+        sandbox_cwd = str(ws / Path(cwd).resolve().relative_to(ws))
+    except ValueError:
+        sandbox_cwd = str(ws)
+
+    required  = ["/usr"]
+    optional  = ["/bin", "/lib", "/lib64", "/etc/alternatives",
+                 "/etc/ssl/certs", "/etc/resolv.conf", "/etc/ld.so.cache"]
+
+    args = ["bwrap", "--new-session", "--die-with-parent"]
+    for p in required: args += ["--ro-bind",     p, p]
+    for p in optional: args += ["--ro-bind-try", p, p]
+    args += [
+        "--proc", "/proc", "--dev", "/dev", "--tmpfs", "/tmp",
+        "--tmpfs", str(ws.parent),        # mask config dir
+        "--dir", str(ws),                 # recreate workspace mount point
+        "--bind", str(ws), str(ws),
+        "--ro-bind-try", str(media), str(media),  # read-only access to media
+        "--chdir", sandbox_cwd,
+        "--", "sh", "-c", command,
+    ]
+    return shlex.join(args)
+
+
+_BACKENDS = {"bwrap": _bwrap}
+
+
+def wrap_command(sandbox: str, command: str, workspace: str, cwd: str) -> str:
+    """Wrap *command* using the named sandbox backend."""
+    if backend := _BACKENDS.get(sandbox):
+        return backend(command, workspace, cwd)
+    raise ValueError(f"Unknown sandbox backend {sandbox!r}. Available: {list(_BACKENDS)}")
diff --git a/nanobot/agent/tools/shell.py b/nanobot/agent/tools/shell.py
index c8876827c..ec2f1a775 100644
--- a/nanobot/agent/tools/shell.py
+++ b/nanobot/agent/tools/shell.py
@@ -10,6 +10,7 @@ from typing import Any
 from loguru import logger
 
 from nanobot.agent.tools.base import Tool, tool_parameters
+from nanobot.agent.tools.sandbox import wrap_command
 from nanobot.agent.tools.schema import IntegerSchema, StringSchema, tool_parameters_schema
 from nanobot.config.paths import get_media_dir
 
@@ -40,10 +41,12 @@ class ExecTool(Tool):
         deny_patterns: list[str] | None = None,
         allow_patterns: list[str] | None = None,
         restrict_to_workspace: bool = False,
+        sandbox: str = "",
         path_append: str = "",
     ):
         self.timeout = timeout
         self.working_dir = working_dir
+        self.sandbox = sandbox
         self.deny_patterns = deny_patterns or [
             r"\brm\s+-[rf]{1,2}\b",          # rm -r, rm -rf, rm -fr
             r"\bdel\s+/[fq]\b",              # del /f, del /q
@@ -83,6 +86,11 @@ class ExecTool(Tool):
         if guard_error:
             return guard_error
 
+        if self.sandbox:
+            workspace = self.working_dir or cwd
+            command = wrap_command(self.sandbox, command, workspace, cwd)
+            cwd = str(Path(workspace).resolve())
+
         effective_timeout = min(timeout or self.timeout, self._MAX_TIMEOUT)
 
         env = os.environ.copy()
diff --git a/nanobot/config/schema.py b/nanobot/config/schema.py
index 47e35070c..dfb91c528 100644
--- a/nanobot/config/schema.py
+++ b/nanobot/config/schema.py
@@ -174,6 +174,7 @@ class ExecToolConfig(Base):
     enable: bool = True
     timeout: int = 60
     path_append: str = ""
+    sandbox: str = ""  # sandbox backend: "" (none) or "bwrap"
 
 class MCPServerConfig(Base):
     """MCP server connection configuration (stdio or HTTP)."""
@@ -192,7 +193,7 @@ class ToolsConfig(Base):
 
     web: WebToolsConfig = Field(default_factory=WebToolsConfig)
     exec: ExecToolConfig = Field(default_factory=ExecToolConfig)
-    restrict_to_workspace: bool = False  # If true, restrict all tool access to workspace directory
+    restrict_to_workspace: bool = False  # restrict all tool access to workspace directory
     mcp_servers: dict[str, MCPServerConfig] = Field(default_factory=dict)
     ssrf_whitelist: list[str] = Field(default_factory=list)  # CIDR ranges to exempt from SSRF blocking (e.g. ["100.64.0.0/10"] for Tailscale)
 
diff --git a/tests/tools/test_sandbox.py b/tests/tools/test_sandbox.py
new file mode 100644
index 000000000..82232d83e
--- /dev/null
+++ b/tests/tools/test_sandbox.py
@@ -0,0 +1,121 @@
+"""Tests for nanobot.agent.tools.sandbox."""
+
+import shlex
+
+import pytest
+
+from nanobot.agent.tools.sandbox import wrap_command
+
+
+def _parse(cmd: str) -> list[str]:
+    """Split a wrapped command back into tokens for assertion."""
+    return shlex.split(cmd)
+
+
+class TestBwrapBackend:
+    def test_basic_structure(self, tmp_path):
+        ws = str(tmp_path / "project")
+        result = wrap_command("bwrap", "echo hi", ws, ws)
+        tokens = _parse(result)
+
+        assert tokens[0] == "bwrap"
+        assert "--new-session" in tokens
+        assert "--die-with-parent" in tokens
+        assert "--ro-bind" in tokens
+        assert "--proc" in tokens
+        assert "--dev" in tokens
+        assert "--tmpfs" in tokens
+
+        sep = tokens.index("--")
+        assert tokens[sep + 1:] == ["sh", "-c", "echo hi"]
+
+    def test_workspace_bind_mounted_rw(self, tmp_path):
+        ws = str(tmp_path / "project")
+        result = wrap_command("bwrap", "ls", ws, ws)
+        tokens = _parse(result)
+
+        bind_idx = [i for i, t in enumerate(tokens) if t == "--bind"]
+        assert any(tokens[i + 1] == ws and tokens[i + 2] == ws for i in bind_idx)
+
+    def test_parent_dir_masked_with_tmpfs(self, tmp_path):
+        ws = tmp_path / "project"
+        result = wrap_command("bwrap", "ls", str(ws), str(ws))
+        tokens = _parse(result)
+
+        tmpfs_indices = [i for i, t in enumerate(tokens) if t == "--tmpfs"]
+        tmpfs_targets = {tokens[i + 1] for i in tmpfs_indices}
+        assert str(ws.parent) in tmpfs_targets
+
+    def test_cwd_inside_workspace(self, tmp_path):
+        ws = tmp_path / "project"
+        sub = ws / "src" / "lib"
+        result = wrap_command("bwrap", "pwd", str(ws), str(sub))
+        tokens = _parse(result)
+
+        chdir_idx = tokens.index("--chdir")
+        assert tokens[chdir_idx + 1] == str(sub)
+
+    def test_cwd_outside_workspace_falls_back(self, tmp_path):
+        ws = tmp_path / "project"
+        outside = tmp_path / "other"
+        result = wrap_command("bwrap", "pwd", str(ws), str(outside))
+        tokens = _parse(result)
+
+        chdir_idx = tokens.index("--chdir")
+        assert tokens[chdir_idx + 1] == str(ws.resolve())
+
+    def test_command_with_special_characters(self, tmp_path):
+        ws = str(tmp_path / "project")
+        cmd = "echo 'hello world' && cat \"file with spaces.txt\""
+        result = wrap_command("bwrap", cmd, ws, ws)
+        tokens = _parse(result)
+
+        sep = tokens.index("--")
+        assert tokens[sep + 1:] == ["sh", "-c", cmd]
+
+    def test_system_dirs_ro_bound(self, tmp_path):
+        ws = str(tmp_path / "project")
+        result = wrap_command("bwrap", "ls", ws, ws)
+        tokens = _parse(result)
+
+        ro_bind_indices = [i for i, t in enumerate(tokens) if t == "--ro-bind"]
+        ro_targets = {tokens[i + 1] for i in ro_bind_indices}
+        assert "/usr" in ro_targets
+
+    def test_optional_dirs_use_ro_bind_try(self, tmp_path):
+        ws = str(tmp_path / "project")
+        result = wrap_command("bwrap", "ls", ws, ws)
+        tokens = _parse(result)
+
+        try_indices = [i for i, t in enumerate(tokens) if t == "--ro-bind-try"]
+        try_targets = {tokens[i + 1] for i in try_indices}
+        assert "/bin" in try_targets
+        assert "/etc/ssl/certs" in try_targets
+
+    def test_media_dir_ro_bind(self, tmp_path, monkeypatch):
+        """Media directory should be read-only mounted inside the sandbox."""
+        fake_media = tmp_path / "media"
+        fake_media.mkdir()
+        monkeypatch.setattr(
+            "nanobot.agent.tools.sandbox.get_media_dir",
+            lambda: fake_media,
+        )
+        ws = str(tmp_path / "project")
+        result = wrap_command("bwrap", "ls", ws, ws)
+        tokens = _parse(result)
+
+        try_indices = [i for i, t in enumerate(tokens) if t == "--ro-bind-try"]
+        try_pairs = {(tokens[i + 1], tokens[i + 2]) for i in try_indices}
+        assert (str(fake_media), str(fake_media)) in try_pairs
+
+
+class TestUnknownBackend:
+    def test_raises_value_error(self, tmp_path):
+        ws = str(tmp_path / "project")
+        with pytest.raises(ValueError, match="Unknown sandbox backend"):
+            wrap_command("nonexistent", "ls", ws, ws)
+
+    def test_empty_string_raises(self, tmp_path):
+        ws = str(tmp_path / "project")
+        with pytest.raises(ValueError):
+            wrap_command("", "ls", ws, ws)